Don't Judge an LLM Only by Its Activations: Discovering Suppressed Safety Features via Counterfactual Activation Potential

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Mechanistic interpretability has emerged as the primary means to understand safety behavior of LLMs. However, existing tools primarily focus on the activating neurons or features of a model. The role of the remaining large set of inactive components is invisible to such methods. This work demonstrates that the inactive set contains safety-critical features that are causally relevant for refusal of harmful prompts. Suppressing such features could turn refusals into compliance, while passing undetected by prevalent interpretability tools. We introduce the Counterfactual Activation Potential (CAP), a metric that quantifies a suppressed feature's latent activation tendency as the product of its encoder alignment (how strongly the input drives it), suppression strength (how strongly active features inhibit it), and safety criticality (how much refusal depends on it). To find suppressed safety features at scale, we propose CAP-guided Safety Feature Discovery (CSFD), a two-stage filtering algorithm that identifies candidate safety features from hundreds of thousands of transcoder features without exhaustive ablation. A significant fraction of trials turn compliant with harmful prompts when a candidate feature is ablated. Under natural jailbreaks, the suppression acting on the highest-CAP features rises 2-4x, and their activation correspondingly falls by up to 80%. Amplifying a feature's suppressors pushes its activation down and raises harmful compliance with prompts related to the suppressed feature, with no such effect for random features. Our experiments span five Gemma, Qwen, and Llama models across various parameter sizes. Our findings indicate that jailbreaks could operate in part by suppressing safety-critical features rather than solely activating harmful ones, and that suppressed features are a necessary complement to activation-focused interpretability of safety behavior.